Přehled

The Department of Physics at the University of Ostrava, Czech Republic, announces an opening for a PhD position in the area of molecular modeling of biomolecules with a focus on molecular dynamics simulations of nucleic acids and proteins. The candidate will be involved (among others) in development of molecular databases for machine learning and force field development.

Field: Computational Chemistry and Physics, Biophysics
University: University of Ostrava
Location: Ostrava, Czech Republic
Advisor: Assoc. Prof. Petr Jurečka (https://orcid.org/0000-0002-3741-3672), Dr. Marie Zgarbová (https://orcid.org/0000-0003-0719-0268), see also http://ffol.upol.cz

What We Offer:

  • A fully-funded PhD position
  • Access to supercomputing facilities
  • Opportunities to participate in teaching activities
  • Involvement in the Life & Environment Research Center Ostrava project, specifically within Research Program 3 – Modeling and Simulations (https://lerco.osu.eu/29453/modeling-and-simulation/)

Requirements:

  • A strong background in one or more of the following areas: computational chemistry or physics, biomolecular simulations, molecular dynamics simulations, quantum chemistry, or related fields.
  • A Master’s degree in one of the aforementioned or related disciplines.
  • Experience with scripting, programming, and calculations using quantum chemistry codes (e.g., Gaussian, GAMESS) or molecular dynamics codes (e.g. Gromacs, Amber).
  • Proficient written and oral communication skills in English.
  • The ability to work independently and collaboratively.

Admission Procedure:

The admission process begins with the submission of your application materials to nano@osu.cz with the e-mail title: “PhD position in molecular modeling of biomolecules” by the 11th of May, 2025. Only shortlisted candidates will be contacted for the next steps.

Application Must Include:

  • A detailed CV.
  • A publication list.
  • A cover letter detailing research interests, motivation, relevant expertise, and any other pertinent information.
  • Names of two established researchers who can provide letters of recommendation.
  • A completed form detailing experiences beyond basic academic requirements. [Download PDF or DOCX]

Optional Attachments:

  • Diploma and diploma supplement (scans).
  • Diploma thesis with supervisor’s and opponent’s assessments (PDF).
  • Evaluation from the supervisor regarding the applicant’s cooperation (signed PDF with contact details).
  • Letters of recommendation (signed PDFs).
  • Proof of English proficiency (ideally an internationally recognized certificate).

Next Steps in Admission:

  • Shortlisted applicants will receive a task to complete.
  • Applicants submitting high-quality work will be invited for an online interview.
  • Further steps in the admission process will be communicated individually.

Important Note:

The receipt of applications will be confirmed by email within one week of delivery.

We are looking forward to all applications!

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